problems with dbiblast
Tõnu Margus
tmargus at ebc.ee
Tue Jun 4 14:46:05 UTC 2002
Hi,
I have problems with blast database formating for emboss.
dbiblast gives an unexpected error. It starts to look file swissprot.phr.pin
not swissprot.pin. Waht could be a reason and how to overcome?
here is program output form screen
tmargus at kobra:blast$ dbiblast
Index a BLAST database
Database name: swissprot
Database directory [.]:
Wildcard database filename [swissprot]: swissprot*
Release number [0.0]: 40
Index date [00/00/00]:
N : nucleic
P : protein
? : unknown
Sequence type [unknown]: P
1 : wublast and setdb/pressdb
2 : formatdb
0 : unknown
Blast index version [unknown]: 2
EMBOSS An error in dbiblast.c at line 640:
cannot open ./swissprot.phr table file ./swissprot.phr.pin
Sincerely Yours
Tõnu Margus
Estonian Biocentre
Riia 23
Tartu 51010
Estonia
E-mail tmargus at ebc.ee
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