emowse

[jérôme Grimplet]

Hi,

I want to known if it's possible to not use the partial factor (partial 
tryptic digest) in emowse. In many cases, the partials cleavages products add 
a lot of matches even when using low partial factor (0.1), so the results are 
very differents with mascott by example. I would like to put zero as partial 
factor.
Another problem, I can't run emowse on an input file larger than 60,000 
proteins (emowse works only on the 60,000 first).

thanks for your help,

Jerome   
-- 
Jérôme Grimplet 
Laboratoire de Biochimie Métabolique et Technologie
UMR Sciences Pour l'Oenologie
2, Place Viala
34060 Montpellier Cedex 01
Tel: 33(0)4.99.61.27.56
Fax: 33(0)4.99.61.28.57
grimplet at ensam.inra.fr