Analyzing Large Sequences
    Sammons, Scott 
    zno6 at cdc.gov
       
    Wed Feb 21 21:54:18 UTC 2001
    
    
  
Greetings:
I am using EMBOSS 1.9.1 on a Solaris 2.8 machine.
I would like to analyze large viruses, ~185 kb.
I seem to be having some odd errors running the getorf
program on sequences of this size. No error messages, but 
getorf is not finding orfs that I know are there.
What is the maximum size sequence that EMBOSS can handle?
I looked through the documentation but could not find info.
Is the defined as integer (32767)?
Thanks, 
Scott Sammons
Centers for Disease Control and Prevention
1600 Clifton Rd, NE
MS G36
Atlanta, GA 30333
404-639-3560 (Voice)
404-639-1331 (FAX)
ssammons at cdc.gov
 
    
    
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