[EMBOSS] EMBOSS and Jemboss installation problems SOLVED!

[Pierre Scotney]

Hello!

I have solved the GNU/Linux EMBOSS and Jemboss installation problems :)

The solution was:

1) edit both /etc/profile (for bash) and /etc/csh.login (for csh) so that 
$PATH includes /usr/local/lib/j2sdk1.4.2/bin path, previously only bash had 
the correct path to the java binaries.

2) use j2sdk1.4.2 as EMBOSS-2.8.0 will not build with j2sdk1.3.1 (Blackdown 
Java-Linux).  May be the documentation/scripts will need to be changed to 
reflect this issue.

Cheers

Pierre

--
Dr Pierre Scotney
Melbourne
Australia

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