[Dynamite] SingleModel with metasequences

[Ewan Birney]

On Wed, 8 Mar 2000, Ian Holmes wrote:

> 
> Are you sure about HMMER?
> 

Yup. End->J (non emitting) J->J (emitting). And in other places.

> 
> No problem to add it back in... you just need to replace the
> MetasequenceVector with some kind of MetasequenceMap i.e.
> map<X,Metasequence> to use STL notation
> 
> first decide whether you want X to be a string or a wrapper class like
> State below
> 
> then roll your own map<X,Metasequence> interface with get & set methods
> 
> finally replace IntVector with sequence<X>
> 

Will this be useful? Hmmm.