[BioSQL-l] Co-ordinates
Trevor Bell
trevorgrahambell at gmail.com
Wed Jan 15 07:05:25 UTC 2014
I worked through the BioSQL tutorial
(http://biopython.org/wiki/BioSQL) and then imported a sequence I am
interested in. Consider the following section of the full GenBank
record of that sequence:
----------
CDS 155..835
/gene="S"
/codon_start=1
/product="S protein"
/protein_id="AAP79717.1"
/db_xref="GI:32330472"
----------
Where in the database schema can I find the co-ordinates of the
gene/protein or the genomic region sequenced? I'm interested in the
"155..835" in the example above. I can find the other data in the
database (S, AAP79717, etc.).
With thanks.
--
Dr Trevor G. Bell
BSc.(Hons), H.Dip.Ed.(PG), MSc., PhD
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