[BioSQL-l] Treating GenBank source features as top level annotation
Hilmar Lapp
hlapp at gmx.net
Wed Nov 18 13:16:40 UTC 2009
On Nov 18, 2009, at 6:06 AM, Peter wrote:
> For example, NC_005816, Yersinia pestis biovar Microtus str. 91001
> plasmid pPCP1, complete sequence:
>
> source 1..9609
> /organism="Yersinia pestis biovar Microtus str. 91001"
> /mol_type="genomic DNA"
> /strain="91001"
> /db_xref="taxon:229193"
> /plasmid="pPCP1"
> /biovar="Microtus"
Just FYI, the sequences coming out of the barcoding projects will have
the lat/long coordinates here, too. Those obviously pertain to the
specimen (and hence to the whole sequence).
-hilmar
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