[BioSQL-l] Location with lt, gt
Richard Holland
holland at eaglegenomics.com
Fri Oct 10 09:46:12 UTC 2008
BioJava refers to the < and > notation as fuzzy locations. See:
http://www.biojava.org/wiki/BioJava:BioJavaXDocs#Working_with_RichLocation_objects.
cheers,
Richard
2008/10/10 Raoul Jean Pierre Bonnal <raoul.bonnal at itb.cnr.it>:
> Dear all,
> how do you store this kind of location ?
> ------------------------------------
> CDS <1..>314
> ------------------------------------
>
> /codon_start=1
> /db_xref="SPTREMBL:Q9QYG8"
> /transl_table=1
> /gene="uk"
> /product="uridine kinase"
> /protein_id="BAA83085.1"
> /translation="KLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEE
>
> FCLPTKKYADVIIPRGADNLVAINLIVQHIQDILNGGLSKRQTNGYLNGYTPSRKRQA
> SES"
>
>
> --
> Ra
>
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--
Richard Holland, BSc MBCS
Finance Director, Eagle Genomics Ltd
M: +44 7500 438846 | E: holland at eaglegenomics.com
http://www.eaglegenomics.com/
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