[BioSQL-l] storing clustering information in seqfeatures tables

[Kannan Vijayan]

Hi,

I was wondering if anybody has successfully managed to store results of 
clustering programs in the biosql schema, in some clean way.  We're currently 
attempting to figure out how to migrate from a home-rolled schema to the 
biosql schema, and this is one feature that, while not currently handled by 
our schema, we would like to be able to handle in the future.

I've only recently started looking at the biosql schema, so I'm not fully up 
to speed on what the best way to do this would be, but I think the 
'seqfeatures' structures would be particularly appropriate for storing this 
information.

Has anybody done this?  I would appreciate any tips that people have to offer.

thanks.
-- 
Kannan Vijayan <kvijayan at gene.pbi.nrc.ca>
Bioinformatics Support Specialist
National Research Council
Plant Biotechnology Institute
110 Gymnasium Place
Saskatoon, SK S7N 0W9
Canada