[BioSQL-l] tigr.pm
matthieu CONTE
m_conte at hotmail.com
Fri Dec 10 05:49:43 EST 2004
I am trying to load tigr rice data in my biosql db with the
load_seqdatabase.pl using the lastest tigr parser on the CVS.
I still have the same problem with null field
Thanks
perl load_seqdatabase.pl --dbuser biosql --dbpass biosql --namespace
tigr_arath --format tigr
/home/conte/pipeline_orthologues/data/arath_tigr/CHR1.R5v01212004.xml
Loading
/home/conte/pipeline_orthologues/data/arath_tigr/CHR1.R5v01212004.xml ...
-------------------- WARNING ---------------------
MSG: insert in Bio::DB::BioSQL::LocationAdaptor (driver) failed, values were
("130","2000","","1") FKs (16962,<NULL>)
Column 'strand' cannot be null
---------------------------------------------------
**************************************
m_conte at hotmail.com
CIRAD
**************************************
_________________________________________________________________
MSN Messenger : dialoguez en temps réel avec vos amis !
http://g.msn.fr/FR1001/866
More information about the BioSQL-l
mailing list