[BioSQL-l] Problem with BioSQL Oracle schema using load_seqdatabase.pl

[Hilmar Lapp]

Are you using the latest version of DBD::Oracle and bioperl-db?

I was having the same issue and solved it to the extent that it worked 
for me. I did have to upgrade DBD::Oracle.

I'll check into this once more and put a test into the suite that 
actually tests a large sequence to have this exposed right when you run 
the tests.

	-hilmar

On Sunday, September 14, 2003, at 08:23  PM, Ni, Jingwei wrote:

> Hi, I just subscribed to the biosql list. I am testing the Oracle 
> BioSQL
> schema using load_seqdatabase.pl. Everything works except when the
> sequence size is <=4000, the scripts complains about inconsistent
> datatype and the sequence cannot be loaded into the biosequence table,
> but all other tables are loaded fine.
>
> Am I doing anything wrong here?
>
> Jingwei
>
> _______________________________________________
> BioSQL-l mailing list
> BioSQL-l at open-bio.org
> http://open-bio.org/mailman/listinfo/biosql-l
>
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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