[BioSQL-l] GBrowse on BioSQL dead in water again

Thomas Down td2@sanger.ac.uk
Tue, 8 Oct 2002 21:25:34 +0100


On Tue, Oct 08, 2002 at 04:16:18PM -0400, Lincoln Stein wrote:
> Hi Elia,
> 
> Alas, the latest CVS update of bioperl-db removed the
> Bio::DB::BioSQL::BioDatabaseAdaptor module, and so broke the
> Bio::DB::Das::BioSQL module that was dependent upon it.  There is no
> obvious documentation of what the preferred interface now is.  Could
> you show me how to rewrite the following script for me to use the
> approved API?

Hilmar Lapp has been working on the BioSQL stuff.  There's
a CVS branch (post-capetown, I think) which should give you
the previous APIs.


     Thomas.