[BioRuby] GSoC work published in Bioinformatics
Pjotr Prins
pjotr.public14 at thebird.nl
Fri Feb 20 10:46:11 UTC 2015
Sambamba was originally an OBF/BioRuby Google Summer of Code project
and has continued to evolve and is used by many sequencing efforts:
Sambamba: fast processing of NGS alignment formats
Bioinformatics (2015) doi: 10.1093/bioinformatics/btv098
http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btv098
Great job by Artem!
If you can think of a project that can end in a paper, don't hesitate
to add them to the OBF or SciRuby project ideas pages.
http://www.open-bio.org/wiki/Google_Summer_of_Code_2015_Ideas
https://github.com/SciRuby/sciruby/wiki/Google-Summer-of-Code-2015-Ideas
We can help with the writeup and mentoring.
Pj.
PS I think especially the active gems should consider participating,
according to biogems.info those are sequenceserver, bio-samtools and
bio-vcf (well, the last is mine).
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