[BioRuby] Problem creating a new biogem

Joachim Baran joachim.baran at gmail.com
Sat Apr 5 17:15:03 UTC 2014


Hi!

  See below for the stack trace that I get when creating a new biogem.

  My environment:

  - ruby 2.0.0p247 (2013-06-27 revision 41674) [x86_64-darwin12.4.0]
  - rubygems 2.0.5

  Not sure whether this will create problems later. For now I have the biogem directory and I work with that, but it might be worth investigating this further.

Thanks,

Joachim

$ biogem biostars-analytics
	create	.gitignore
	remove jeweler rcov lines
	create	Rakefile
	create	Gemfile
	create	LICENSE.txt
	create	README.rdoc
	create	.document
	create	lib
	create	lib/bio-biostars-analytics.rb
	create	test
	create	test/helper.rb
	create	test/test_bio-biostars-analytics.rb
	create	lib/bio-biostars-analytics.rb
	create	lib/bio-biostars-analytics
	create	lib/bio-biostars-analytics/biostars-analytics.rb
	create	README.rdoc
	create	README.md
	append	.gitignore
	append	.travis.yml
Jeweler has prepared your gem in bioruby-biostars-analytics
Please provide your Github password to create the Github repository
/Users/joachim/.rvm/gems/ruby-2.0.0-p247/gems/bio-gem-1.3.5/lib/bio-gem/mod/jeweler.rb:84:in `rescue in create_and_push_repo': uninitialized constant Jeweler::Generator::Github (NameError)
	from /Users/joachim/.rvm/gems/ruby-2.0.0-p247/gems/bio-gem-1.3.5/lib/bio-gem/mod/jeweler.rb:79:in `create_and_push_repo'
	from /Users/joachim/.rvm/gems/ruby-2.0.0-p247/gems/jeweler-1.8.4/lib/jeweler/generator.rb:130:in `run'
	from /Users/joachim/.rvm/gems/ruby-2.0.0-p247/gems/bio-gem-1.3.5/lib/bio-gem/application.rb:38:in `block in run!'
	from /opt/local/lib/ruby1.9/1.9.1/fileutils.rb:125:in `chdir'
	from /opt/local/lib/ruby1.9/1.9.1/fileutils.rb:125:in `cd'
	from /Users/joachim/.rvm/gems/ruby-2.0.0-p247/gems/bio-gem-1.3.5/lib/bio-gem/application.rb:36:in `run!'
	from /Users/joachim/.rvm/gems/ruby-2.0.0-p247/gems/bio-gem-1.3.5/bin/biogem:13:in `<top (required)>'
	from /opt/local/bin/biogem:19:in `load'
	from /opt/local/bin/biogem:19:in `<main>'





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