[BioRuby] Travis-CI & bundler problem

[Joachim Baran]

Hi Iain!

  Thanks for looking into this!

  Since the Travis-CI tests pass for all designated Ruby environments
again, I will leave the tests in their current state for now. I will not
merge code that affects core classes, if the changes are only syntactical
and do not provide significant benefits to BioInterchange.

Joachim


On 26 November 2013 05:04, Iain Barnett <iainspeed at gmail.com> wrote:

> Hi Joachim,
>
> Sorry for the late reply. I've not had a chance to look in depth at this,
> but the test still hangs on my machine... though it's not the quickest
> machine on the planet. The main thing is that the Travis tests run.
>
> I'll put in a pull request when I've had time to give it a proper look. In
> the meantime, you can always fetch the stuff I've done already to have a
> look using
>
>     git remote add yb66 https://github.com/yb66/BioInterchange.git
>     git fetch yb66/develop
>
> Rather than merge it into your master, you may want to create a branch off
> of master to experiment with. From master:
>
>     git checkout -b branch-name
>     git merge yb66/develop
>
> Although I'm pretty sure you'll get some merge conflicts! When I get a
> look I'll try and clean those up for you. Apologies if you know all the
> above commands, but git is so arcane I never assume anyone has knowledge of
> it! :)
>
> Regards,
> Iain
>
>
> On 13 November 2013 15:18, Joachim Baran <joachim.baran at gmail.com> wrote:
>
>> Hello,
>>
>>   Iain, I found out why the tests got stuck: an IO.pipe was filled up
>> (synchronous read/write control flow). I changed the test where the problem
>> occurred to use a temporary file instead.
>>
>>   If you would like to add your changes that you made to the unit tests,
>> then please update your fork and send me a pull request later.
>>
>>   Note: BioInterchange no longer supports Ruby 1.8. It requires 1.9 or
>> later now.
>>
>> Joachim
>>
>>
>>
>