[BioRuby] ruby-2.0.0 and gem
Naohisa GOTO
ngoto at gen-info.osaka-u.ac.jp
Fri May 24 19:19:04 UTC 2013
Hi,
Thank you for reporting bug.
I've just released bio-1.4.3.0001.gem.
This release fixes the gem installation bug, and some other
bug fixes are included.
https://rubygems.org/gems/bio
Naohisa Goto
ng at bioruby.org
On Fri, 17 May 2013 16:40:49 +0900
Tomoaki NISHIYAMA <tomoakin at kenroku.kanazawa-u.ac.jp> wrote:
> Hi,
>
> Installing bioruby from gem on ruby-2.0.0 produced the following error.
> I assume these are effectively harmless for normal operation,
> but we should address in 1.4.4 or any next version.
>
> It looks like the system tries to convert ChangeLog to document using RDoc,
> which should just useless.
> I still don't have found the right document of gem, RDoc systems...
>
> Best regards,
>
> /opt/appl/ruby2/bin/gem install bio
> Fetching: bio-1.4.3.gem (100%)
> Successfully installed bio-1.4.3
> Parsing documentation for bio-1.4.3
> Before reporting this, could you check that the file you're documenting
> has proper syntax:
>
> /opt/appl/ruby2/bin/ruby -c ChangeLog
>
> RDoc is not a full Ruby parser and will fail when fed invalid ruby programs.
>
> The internal error was:
>
> (RangeError) integer 76984313719700134 too big to convert to `int'
>
> ERROR: While executing gem ... (RangeError)
> integer 76984313719700134 too big to convert to `int'
> --
> Tomoaki NISHIYAMA
>
> Advanced Science Research Center,
> Kanazawa University,
> 13-1 Takara-machi,
> Kanazawa, 920-0934, Japan
>
>
> _______________________________________________
> BioRuby Project - http://www.bioruby.org/
> BioRuby mailing list
> BioRuby at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioruby
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