[BioRuby] hmmer3
Ben Woodcroft
donttrustben at gmail.com
Wed May 16 11:09:24 UTC 2012
Hi guys,
I noticed today that there isn't HMMER3 support in bioruby - particularly
I'm interested in a parser for hmmsearch outputs as I want to iterate over
aligned positions.
I noticed that there is mention of this in the 1.4.1 release notes, that
hmmer3 will be supported in 1.5, although I'm not sure what exactly this
means.
http://news.open-bio.org/news/2010/10/bioruby-1-4-1-released/
Can I ask what the state of this merge is please? Is there code somewhere
just waiting to be merged? Can it be quickly spun out into a biogem in the
meantime?
Thanks,
ben
--
Ben Woodcroft
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