[BioRuby] BioRuby fixed for JRuby and Rubinius failures

[Clayton Wheeler]

On May 17, 2012, at 12:51 PM, Pjotr Prins wrote:

> I don't know if you all track github, but thanks to two GSoC coders
> (Artem and Clayton) BioRuby got fixed to run on JRuby and Rubinius.
> 
> Travis-CI should show the green light for all Rubies once Rubinius
> itself gets updated on Travis :)

Thanks Pjotr. Unfortunately I think we're not going to be quite there for JRuby just yet; we've hit a couple of JRuby bugs which will probably need to be fixed to solve some of the failures. Also, I think we may be stuck with PhyloXML test failures under JRuby in 1.9 mode until we split that out into a separate gem. It's definitely progress, though.

Clayton Wheeler
cswh at umich.edu