[BioRuby] marshal data too short
Michal
mictadlo at gmail.com
Wed Jan 26 00:41:11 UTC 2011
Hi,
I installed on Ubuntu 10.10 (Linux Mint) Ruby 1.9.2 in the following way
$ tar xvfz ruby-1.9.2-p136.tar.gz
$ cd ruby-1.9.2-p136/
$ ./configure --prefix=/home/mictadlo/apps/ruby
$ make
$ make install
$ vim ~/.bashrc
export APPS=/home/mictadlo/apps
export RUBY_HOME=$APPS/ruby
export LD_LIBRARY_PATH=/RUBY_HOME/lib
PATH=$RUBY_HOME/bin:$PATH
$ . ~/.bashrc
$ ruby -v
ruby 1.9.2p136 (2010-12-25 revision 30365) [i686-linux]
$ tar xvfz bioruby-1.4.1.tar.gz
$ cd bioruby-1.4.1/
$ ruby setup.rb
$ bioruby
Loading config (/home/mitlox/.bioruby/shell/session/config) ... done
Loading object (/home/mitlox/.bioruby/shell/session/object) ...
Error: Failed to load (/home/mitlox/.bioruby/shell/session/object) :
marshal data too short
done
. . . B i o R u b y i n t h e s h e l l . . .
Version : BioRuby 1.4.1 / Ruby 1.9.2
bioruby> exit
How can I fix the error in BioRuby?
Thank you in advance.
Michal
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