[BioRuby] A new plugin: bio-genomic-interval

MISHIMA, Hiroyuki missy at be.to
Thu Apr 7 05:03:30 UTC 2011


Hi all,

I have uploaded a new Bioruby plugin 'bio-genomic-interval'.

The Bio::GenomicInterval class is designed to handle genomic intervals
such as "chr1:123-456". The class has methods to detect the overlapping
status between two intervals. It may help to avoid messy case branching
and improve readability of codes.

Developmental tools for BioRuby plugin and documents in the BioRuby wiki
were very helpful. Thank you all the authors.

Please see also the followings:
GitHub -
   https://github.com/misshie/bioruby-genomic-interval
RubyGems.org -
   https://rubygems.org/gems/bio-genomic-interval

Sincerely yours,
Hiro.
-- 
MISHIMA, Hiroyuki, DDS, Ph.D.
COE Research Fellow
Department of Human Genetics
Nagasaki University Graduate School of Biomedical Sciences



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