[BioRuby] Ruby and Statistics

[Pjotr Prins]

Hi Raoul,

Biolib makes the GSL available for Ruby, as well as Rlib. So many
standard statistics can be used, including linear regression, etc. If
there is other libraries you want to use we can consider mapping
those to Ruby (BOOST is a candidate).

Main problem is that I am still in the process of documenting biolib
before its release 1.0.

If you are interested in using these tools, we can work it out between
us. Just tell me what functions you want, and I'll help map/document
them. Be great for Biolib - as testing is a good thing.

Pj.

On Thu, Mar 11, 2010 at 10:53:02PM +0900, Naohisa GOTO wrote:
> Hi,
> 
> I found some modules, but I haven't used them.
> 
> math-statistics: http://www.notwork.org/~gotoken/ruby/p/statistics/
> 
> statarray: http://rubyforge.org/projects/statarray/
> 
> ruby-stats: http://pallas.telperion.info/ruby-stats/
> 
> Naohisa Goto
> ngoto at gen-info.osaka-u.ac.jp / ng at bioruby.org
> 
> On Thu, 11 Mar 2010 14:02:23 +0100
> "Raoul Bonnal" <bonnalraoul at ingm.it> wrote:
> 
> > Hello Folks, 
> > I need to do statistical computations in Ruby, some time very basic operations like mean and stdv
> > Which library do you suggest ? 
> > I don't want to use rsruby (R), for now. Er extend every time Array.
> > 
> > I found this: ruby-statsample but I don't know if is the best one.
> > 
> > --
> > Raoul J.P. Bonnal
> > Life Science Informatics
> > Integrative Biology Program
> > Fondazione INGM
> > Via F. Sforza 28
> > 20122 Milano, IT
> > phone: +39 0 200 662 326
> > fax: +39 0 200 662 346
> > http://www.ingm.it
> > 
> > 
> > 
> > _______________________________________________
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> 
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