[BioRuby] [GSoC][NeXML and RDF API] Code Review.

[Naohisa GOTO]

Most part of the special testing program created by Diana for
PhyloXML is now put in sample/test_phyloxml_big.rb, i.e. it is
now regarded as a sample script.

To run the program, for example,
 % mkdir /tmp/phyloxml
 % ruby sample/test_phyloxml_big.rb /tmp/phyloxml -v

It executes round-trip tests for large PhyloXML files.
Data files are downloaded from the internet and are stored
to a directory specified by the user.

Naohisa Goto
ngoto at ge-info.osaka-u.ac.jp / ng at bioruby.org

On Fri, 25 Jun 2010 08:51:58 +0200
Pjotr Prins <pjotr.public14 at thebird.nl> wrote:

> > Actually I have not done anything here. I will benchmark and profile the
> > code and discuss the results here.
> 
> Diana created a special profiling branch. It was really helpful to
> profile.
> 
> Pj.
> 
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-- 
後藤 直久  ngoto at gen-info.osaka-u.ac.jp
大阪大学微生物病研究所 遺伝情報実験センター ゲノム情報解析分野(安永研)
Phone: 06-6879-8365 / FAX: 06-6879-2047