[BioRuby] contribute to Bioruby

[Naohisa GOTO]

Hi Emanuele,

No priority, and please choose what you like and what you
can do now.

For "4) charts or fancy graphics from data", many people
are interested in, but still few codes (Bio::Graphics etc).
There may be many different approches. To write codes
useful for biologists, knowing visualization examples in
the field of biology/bioinformatics may be needed.
For the purpose, reading recent research papers and/or
studying what other projects do (BioConductor, BioJava,
Biopython, BioPerl, etc) would be good.

If you like "6) update BioSQL support to latest revision",
discuss with Raoul, maintener of BioRuby BioSQL support.

About ChemRuby, first, please try to use it. It is great if you
can write good example scripts using BioRuby with ChemRuby.
If you find bug, please fix. If you feel something missing,
please add new features.

Thank you,

Naohisa Goto
ngoto at gen-info.osaka-u.ac.jp / ng at bioruby.org

On Tue, 20 Jul 2010 16:07:43 +0200
Emanuele Orlando <emanuele.orlando at gmail.com> wrote:

> Thanks Naohisa, sure cross-posting is a good idea.
> In your opinion, there's some priority where focused?
> Raoul, about your list i could be interested for point 4 and 6. But i wait
> for your feedback :)
> Regards,
> -- 
> Emanuele Orlando
> http://www.emanueleorlando.com
> 
> 
> On Tue, Jul 20, 2010 at 2:59 PM, Naohisa GOTO
> <ngoto at gen-info.osaka-u.ac.jp>wrote:
> 
> > Hi,
> >
> > On Tue, 20 Jul 2010 21:35:40 +0900
> > Naohisa GOTO <ngoto at gen-info.osaka-u.ac.jp> wrote:
> >
> > > I tried to subscribe to the mailing list chemruby-list-jp
> > > in RubyForge, but currently no response from the server.
> > > It seems the list is stopped.
> >
> > It still works.
> > I've just received subscription confirmation mail,
> > and I've subscribed to the list now.
> >
> > I think cross-posting is also good, because there may be
> > few persons in the chemruby list.
> >
> > Naohisa Goto
> > ngoto at gen-info.osaka-u.ac.jp / ng at bioruby.org
> >