[BioRuby] KEGG API
遠藤大二
daijiendoh at gmail.com
Thu Jul 8 11:41:57 UTC 2010
Dear All
I have a question about KEGG API on BioRuby.
When I use "type" method, "deprecated" message was returned.
While, the method "type" is still working, refer to KEGG manual.
## Script I used is below
relations = get_element_relations_by_
pathway('path:bsu00010')
relations.each do |rel|
puts rel.element_id1
puts rel.element_id2
puts rel.type
rel.subtypes.each do |sub|
puts sub.element_id
puts sub.relation
puts sub.type
end
end
Result for sub.type => "sub.type was deprecated use class"
How can I receive type property in the class
"get_element_relations_by_pathway" ?
With best wishes,
Daiji Endoh
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