[BioRuby] Announcing BigBio project for Ruby

[Jan Aerts]

Interesting... Planning to incorporate SAM/BAM alignment formats for
nextgen sequences?

jan.

2009/11/26 Pjotr Prins <pjotr.public14 at thebird.nl>:
> BigBio = BIG DATA computing (for Ruby)
>
> BigBio is an initiative to a create high performance libraries for big data
> computing in biology - initially for the Ruby language.
>
> The Ruby version of BioBig uses BioRuby, when sensible, but provides an
> interface with a different design. Also, unlike BioRuby which aims to be pure
> Ruby, it uses BioLib C/C++ functions for increased performance and reduced
> memory consumption.
>
> The first module is an (indexed) FastaReader which does not load the
> full FASTA file in memory.
>
> http://github.com/pjotrp/bigbio
>
> Pj.
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