[BioRuby] error with big fasta files
K. Patil
kpatil at science.uva.nl
Wed Jan 7 13:32:52 UTC 2009
Hi,
I am trying to process some big fasta files. I get the following error;
/XXX/rubygems/bioruby-1.2.1/lib/bio/db/fasta.rb:156:in `initialize':
private method `sub' called for nil:NilClass (NoMethodError)
The corresponding file contains only one sequence with 3200227952
characters (there are no new lines in the file except the one after the
header).
Any clues?
Cheers,
Kaustubh
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