[BioRuby] Bioruby Website Problems

[Ben Woodcroft]

Thanks for the quick reply.

That togows site looks cool.

2008/9/30 Toshiaki Katayama <ktym at hgc.jp>

> Hi,
>
> Sorry for any inconveniences.
>
> I forgot to care about this, but it is due to our server replacement.
> The bioruby.org services (including BioFetch server) will be unavailable
> until Oct 2nd.
>
> Meanwhile, I can recommend you to use TogoWS service hosted at
>
> http://togows.dbcls.jp/entry/pdb/2A06
>
> which we have developed these months utilizing BioRuby functionality.
>
> Regards,
> Toshiaki Katayama
>
> On 2008/09/30, at 10:55, Ben Woodcroft wrote:
>
> > Hi,
> >
> > I am having problems using the bioruby.org site. My first problem was
> that
> > the fetch function started giving me 404s:
> >
> >>> pdb = Bio::Fetch.new.fetch('PDB','2A06')
> > OpenURI::HTTPError: 404 Not Found
> >    from /usr/lib/ruby/1.8/open-uri.rb:277:in `open_http'
> >    from /usr/lib/ruby/1.8/open-uri.rb:616:in `buffer_open'
> >    from /usr/lib/ruby/1.8/open-uri.rb:164:in `open_loop'
> >    from /usr/lib/ruby/1.8/open-uri.rb:162:in `catch'
> >    from /usr/lib/ruby/1.8/open-uri.rb:162:in `open_loop'
> >    from /usr/lib/ruby/1.8/open-uri.rb:132:in `open_uri'
> >    from /home/ben/forays/bioruby_wwood/lib/bio/command.rb:223:in
> `read_uri'
> >    from /home/ben/forays/bioruby_wwood/lib/bio/io/fetch.rb:109:in `fetch'
> >    from (irb):13
> >
> > Went to bioruby.org/rdoc in firefox and that also fails. bioruby.orgitself
> > redirects to the Human Genome Center (Tokyo Uni) front page.
> >
> > Thanks,
> > ben
> >
> > --
> > FYI: My email addresses at unimelb, uq and gmail all redirect to the same
> > place.
> > _______________________________________________
> > BioRuby mailing list
> > BioRuby at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/bioruby
>
>
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>



-- 
FYI: My email addresses at unimelb, uq and gmail all redirect to the same
place.