[BioRuby] Translate ambiguous sequence

[Naohisa GOTO]

On Tue, 16 Sep 2008 13:56:14 +0900
Toshiaki Katayama <ktym at hgc.jp> wrote:

> Hi,
> 
> > It was set to false for the default for just not to
> > change the default behavior and is ok to make true for me.
> 
> I just thought that if the main application of the 'translate'
> method is to translate gene to protein sequence, current
> implementation is incomplete and should be changed.
> If not, retain the current behavior may be better.

I'm using the "translate" not only for whole genes, but also
for partial sequences and/or sequences with unknown start
positions. So, I don't want to change the default.

-- 
Naohisa Goto
ngoto at gen-info.osaka-u.ac.jp / ng at bioruby.org