[BioRuby] parsing Prosite data
bio scientist
pathoquest at gmail.com
Sun Apr 27 01:48:02 UTC 2008
How can we parse Prosite data using Bioruby? I am looking for a way to
populate a database table with Prosite patterns and their IDs that
correspond to a set
of genes. For example:*
**GeneID GeneName PrositeID PrositePattern Consensus**
*
1234 xyzA PSxxxxx KDEL
[KRHQSA]-[DENQ]-E-L
I have not yet fully grasped how parsing works. So any help and links to
resources will go a long way. Thanks.
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