[BioRuby] how to retrieve a genbank record by GI

Robert Citek robert.citek at gmail.com
Wed Dec 19 19:39:01 UTC 2007


On Dec 19, 2007 10:03 AM, Sharvari Gujja <sgujja at broad.mit.edu> wrote:
> I am new to Ruby and Bioruby and am amazed at how simple and yet
> powerful is it.
>
> I am trying to access a genbank record (NCBI) by GI number. I have tried
> Bio::Fetch, Bio::Registry but none seems to work.

Can you give an example of what you've tried?  Also, on what system
are you running bioruby on, e.g. Windows XP, Cygwin in Windows, Ubuntu
Linux, Mac OS X, Solaris?  What version of bioruby?

Regards,
- Robert



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