[BioRuby] concatenate two EMBL sequence files
jan aerts (RI)
jan.aerts at bbsrc.ac.uk
Mon Jan 16 08:46:12 EST 2006
Hello all,
I'm trying to concatenate two EMBL files (_with_ features) into one larger sequence. Of course, positions of features of the second sequence have to recalculated in the new sequence.
e.g.:
sequence 1 = 100 bp
feature A: 5..10
sequence 2 = 200 bp
feature B: 15..20
=> concatenated sequence 3 = 300 bp
feature A: 5..10
feature B: 115..120
I'd like to write out the new sequence as an EMBL file.
Can anyone point me in the right direction? Many thanks.
A possible perl-convert,
Jan Aerts, PhD
Bioinformatics Group
Roslin Institute
Roslin
Scotland, UK
More information about the BioRuby
mailing list