[Biopython] Volunteers for making Biopython release 1.77

Peter Cock p.j.a.cock at googlemail.com
Sat May 23 17:31:29 UTC 2020


Excellent - let's hope there are no surprises,

Peter

On Sat, May 23, 2020 at 6:28 PM Daley, Christopher <dalchr28 at evergreen.edu>
wrote:

> I've got time this weekend and already have a branch with most of (A)
> ready to go.  I'll work through the rest of the steps today with a Monday
> release date in mind.
>
> I've got an i386 container building at the moment to see if there's an
> obvious cause/fix for https://github.com/biopython/biopython/issues/2863
>
> My github username is as good as any I figure.
>
> Chris
> ------------------------------
> *From:* Peter Cock <p.j.a.cock at googlemail.com>
> *Sent:* Saturday, May 23, 2020 8:19 AM
> *To:* Daley, Christopher <dalchr28 at evergreen.edu>
> *Cc:* Michiel de Hoon <mjldehoon at yahoo.com>; biopython at biopython.org <
> biopython at biopython.org>
> *Subject:* Re: [Biopython] Volunteers for making Biopython release 1.77
>
> Looks ready to go - no other last minute issues have been raised, have
> they?
>
> I'd like to include this, but won't hold it up to wait:
>
> https://github.com/biopython/biopython/pull/2334
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fbiopython%2Fbiopython%2Fpull%2F2334&data=02%7C01%7Cdalchr28%40evergreen.edu%7Cca77afc11f1a49cbcff008d7ff2cb16d%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637258439728005204&sdata=RpTbMIX%2BijIdCkvblgFDD1J0Vxg89nf2rsKdrNGOR8g%3D&reserved=0>
>
> Also any ideas on the remaining Debian / BLAST+ issue welcome:
>
> https://github.com/biopython/biopython/issues/2863
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fbiopython%2Fbiopython%2Fissues%2F2863&data=02%7C01%7Cdalchr28%40evergreen.edu%7Cca77afc11f1a49cbcff008d7ff2cb16d%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637258439728015199&sdata=T7vNcs%2FaGvfEyT7NecUvXgEkW3vbcoHI6OucILGnPFk%3D&reserved=0>
>
> Chris - against the background instructions
> https://biopython.org/wiki/Building_a_release
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fbiopython.org%2Fwiki%2FBuilding_a_release&data=02%7C01%7Cdalchr28%40evergreen.edu%7Cca77afc11f1a49cbcff008d7ff2cb16d%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637258439728015199&sdata=%2BDb4SZrqly5IzAt5740Bb2jsvYJplm%2F%2BxiWkGn9IVBI%3D&reserved=0>
> do you want to start with:
>
> (A) pull request to the main repository update the version in __init__.py
> and the tutorial,
> and NEWS.rst - perhaps dated Monday if you're going to be able to work on
> it this weekend?
> Otherwise give yourself a couple of days leeway as some of these steps
> will need me
> or another core developer to merge on your behalf.
>
> (B) pull request to the DIST repository with updated Tutorial built with
> that
>
> The next steps must wait on those pull requests being merged. Note once
> (A) is merged,
> TravisCI should update the API docs for 1.77 automatically:
> https://github.com/biopython/docs
> <https://nam02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fbiopython%2Fdocs&data=02%7C01%7Cdalchr28%40evergreen.edu%7Cca77afc11f1a49cbcff008d7ff2cb16d%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637258439728025196&sdata=fnmw3xVbvgIUGFEi5gEvz4P0uozsSsrschVgadqJ9oA%3D&reserved=0>
>
> (C) Once (A) is merged, pull request the wheel repository to build the
> wheels
>
> (D) Once (A) is merged, pull request to the website with the new tar-ball
> and zip
>
> (E) Draft a release announcement based on the NEWS.rst file, I can set you
> up with
> an account on the open-bio.org
> <https://nam02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fopen-bio.org%2F&data=02%7C01%7Cdalchr28%40evergreen.edu%7Cca77afc11f1a49cbcff008d7ff2cb16d%7C22adcff7c06f49a68f2050711c40ddaa%7C0%7C0%7C637258439728035194&sdata=Wrh5h%2F4KE86jKEWZvjWaL48YS5Wh1Vpgo6nwf7weMQ8%3D&reserved=0>
> WordPress for that - do you want the same username
> as your GitHub?
>
> Peter
>
>
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