[Biopython] Biopython 1.77 plans

[João Rodrigues]

Yes. I'd say go for the release and if they are ready or near-ready by
then, we include them. Just wanted to mention them since it's been quite a
lot of work on Rob's part to integrate his work in Biopython.

Peter Cock <p.j.a.cock at googlemail.com> escreveu no dia quarta, 29/01/2020
à(s) 15:08:

> You mean these?
>
> https://github.com/biopython/biopython/pull/2399
> https://github.com/biopython/biopython/pull/2400
>
> If they're ready soon, then sure.
>
> Peter
>
> On Wed, Jan 29, 2020 at 11:01 PM João Rodrigues <
> j.p.g.l.m.rodrigues at gmail.com> wrote:
>
>> Hi Peter,
>>
>> If there's time, it would be nice to merge Rob Miller's internal
>> coordinate code, but we can also leave it for the next release otherwise.
>>
>> Cheers,
>>
>> João
>>
>> Peter Cock <p.j.a.cock at googlemail.com> escreveu no dia quarta,
>> 29/01/2020 à(s) 07:58:
>>
>>> Hello all,
>>>
>>> We have indeed done a *lot* of Python 2 cleanup over December and into
>>> January 2020, and finished applying black to all of Biopython except the
>>> tests.
>>>
>>> There is still some more of this maintenance work on going, but I think
>>> my proposal aiming to release the Python 3 only Biopython 1.77 in early
>>> February 2020 is still sensible.
>>>
>>> Again, are there any new things people are working on, or important bug
>>> fixes we should wait for?
>>>
>>> Thank you,
>>>
>>> Peter
>>>
>>> On Tue, Jan 7, 2020 at 4:14 PM Peter Cock <p.j.a.cock at googlemail.com>
>>> wrote:
>>>
>>>> Dear Biopytoneers,
>>>>
>>>> Biopython 1.76 released 20 December 2019 was our last release to
>>>> support Python 2, although surprisingly the same day it was announced
>>>> that Python 2.7 got a last minute support extension until April 2020:
>>>>
>>>> https://www.python.org/psf/press-release/pr20191220/
>>>>
>>>> Since then we've been busy removing legacy code and workarounds needed
>>>> for Python 2 in Biopython, focussed on supporting Python 3.6 or later
>>>> only. At the current rate, we'll have finished the bulk of that work
>>>> later this month.
>>>>
>>>> Another milestone in sight is adoption of the black style for our
>>>> source code (although the tests will take a while longer).
>>>>
>>>> https://github.com/psf/black
>>>>
>>>> While neither of these goals in themselves adds any new functionality,
>>>> I think that would be a good point to release Biopython 1.77 - perhaps
>>>> early February 2020?
>>>>
>>>> Are there any other new things people are working on, or important bug
>>>> fixes we should wait for?
>>>>
>>>> Peter
>>>>
>>> _______________________________________________
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>>> https://mailman.open-bio.org/mailman/listinfo/biopython
>>
>>
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