[Biopython] Phylo.draw_graphviz(tree) not showing node names

Jan Zaucha Jan.Zaucha at bristol.ac.uk
Thu Jan 22 16:02:10 UTC 2015


Hi everyone,

I'm trying to visualize the trees I generate, but for some reason the plots
do not display the node names. When I print the tree each node has an
associated name (string format). Phylo.draw(tree) also works fine and plots
a tree with the node names.

I simply use:
Phylo.draw_graphviz(tree)
pylab.show()

There is no error, I can't work out how to force the node names to be
printed.

Any ideas?

Thanks,
Jan Zaucha

-- 
Jan Zaucha
Bristol Centre for Complexity Sciences
Computational Genomics Group
University of Bristol
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