[Biopython] blastdbcmd
Frederico Moraes Ferreira
ferreirafm at usp.br
Fri Feb 22 17:01:02 UTC 2013
Hi there Biopythoneers,
As long as I know, there isnt't a blastdbcmd submodule into Biopython.
So, I've been writing the blast matched sequences ID's to a file,
fetching them all with a subprocess and reading with SeqIO afterwards.
In some cases, however, I miss a blastdbcmd parser to make things easy.
How do you guys are dealing with this?
Best,
Fred
More information about the Biopython
mailing list