[Biopython] help with NCBIXML.parse

[Peter Cock]

On Wed, Mar 28, 2012 at 4:32 PM,  <ferreirafm at usp.br> wrote:
>
>
>
>> Citando Peter Cock <p.j.a.cock at googlemail.com>:
>>
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>> What does 'print blast_cline' give? i.e. What is the actual command
>> being called.
>
>
> A long list of:
> <Bio.Blast.Record.Blast instance at 0xc29638>
> <Bio.Blast.Record.Blast instance at 0xc29f80>
> <Bio.Blast.Record.Blast instance at 0xc8c830>
> <Bio.Blast.Record.Blast instance at 0xc8ce18>
> <Bio.Blast.Record.Blast instance at 0xc97710>
> <Bio.Blast.Record.Blast instance at 0xc97f38>
> ...

That's the BLAST parser's output - I mean the NcbiblastpCommandline
object you assigned to variable blast_cline.

>> Which version of NCBI BLAST+ are you using?
>
> 2.2.26+

Huh, that is the latest. I'm still using 2.2.25+ here.

Peter