[Biopython] History, Efetch, and returned records limits
Mariam Reyad Rizkallah
mrrizkalla at gmail.com
Sat Apr 14 08:35:52 EDT 2012
Dear community,
I aim to get sequences by a list of gi (using efetch and history
variables), for a certain taxid (using esearch). I always get the first
10,000 records. For example, I need10,300 gi_ids, I split them into list of
10,000 and submit them consecutively and still getting the first 10,000
records. I tried batch approach in Biopython tutorial, didn't even reach
10,000 sequences.
Is there a limit for NCBI's returned sequences?
Thank you.
Mariam
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