[Biopython] StructureBuilder

[João Rodrigues]

Hello Stefania,

It should be possible to copy the entire protein yes, but I would rather use
deepcopy <http://docs.python.org/library/copy.html#copy.deepcopy> to create
a fully new Structure object and manipulate that one.

Something along the lines of:

import copy

[ ... Parse your structure to s...]

s_copy = copy.deepcopy(s)
for atom in s_copy.get_atoms():
  *here use either atom.transform or just modify atom.coord*


Cheers,

João [...] Rodrigues
http://nmr.chem.uu.nl/~joao



2011/10/5 Nana Trapnest <nanatrapnest at hotmail.it>

>
> Hello,
> is it possible with structure builder copy all a protein and change atoms
> coord??? How can I do this??
> Thanks to all of you!
> Stefania
>
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