[Biopython] Antwort: Re: Antwort: Re: Antwort: Re: Antwort: Re: Antwort: Re: Antwort: Re: installation as non-administrator

[Paul.Czodrowski at merck.de]

[Contact details redacted.]

Peter Cock <p.j.a.cock at googlemail.com> wrote on 04.05.2011 16:13:47:

> On Wed, May 4, 2011 at 2:36 PM,  <Paul.Czodrowski at merck.de> wrote:
> >>
> >> Do you fancy trying gdb to get a stack trace for us?
> >
> > How shall I understand your question? Shall I use the gnu debugger
> > in order to get some debuggable output?
>
> Yes please.
>
> With hindsight, "Could you try using the gnu debugger (gdb) to get
> a stack trace?" would have been clearer. Are you familiar with gdb?
>
> Was it the "Do you fancy *activity*?" phrasing that was unclear?
> Basically meaning "Would you like to do *activity*?".

Yes, it was just the expression you used. I have to admit that English is
not my mother tongue.

>
> > What is the worst case scenario related to biopython, i.e. could it
> > ultimately lead to any errors/instabilities?
>
> It looks like if you tried to use Biopython's Bio.Entrez module to
> parse XML files from the NCBI it would crash. If you are not going
> to use that module, you should be fine.

Good news, thanks :)

And thanks for all the other help, also to JOAO!!


Cheers,
Paul

>
> Peter


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