[Biopython] using a function on a batch of files
Dilara Ally
dilara.ally at gmail.com
Mon Jun 27 22:33:42 UTC 2011
Hi All
I'm a newbie to python and I'm interested in using a function on a batch
of files.
I know that in R, you can set the working directory to the directory of
interest. Is there a way to do this in Python? This would allow me to
access files that were in a different location than where the script
file is. The reason I would be interested to do this is that I have a
function that I want to apply to 400 different files. If I were
scripting in R (which I am familiar with) I could use the fn list.files
that would list the files in the directory. Then I could read them in
one by one with a loop. Apply the function and then write the files to
a different directory.
What is the best way to do this in python?
Thanks for the help.
Cheers, Dilara
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