[Biopython] PSI-BLAST

malvika sharan malvikasharan at gmail.com
Sun Jul 17 21:53:03 UTC 2011


Hi All,

I am trying to code WWW version of PSI-BLAST. My intention is to integrate
PSI-Blast in my tool in order to find distant homologs.

i some how can not run the commandline version of psi blast (from
Bio.Blast.Applications import *NcbipsiblastCommandline*) as it states the
error
*" **Python* error: ImportError: *cannot* import *name
**NcbipsiblastCommandline
"*
*
*
*There are not much information available about it. Can somebody figure out
why?*
*
*
*Malvika*
*
*



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