[Biopython] PDBParser Class --> Output

[Willis, Jordan R]

Hello,

Now I am getting this warning which automatically prints,

PDBConstructionWarning: Used element 'C' for Atom (name=CE1) with given element ''
 warnings.warn(msg, PDBConstructionWarning)


I think this is what you meant by guessing the elements, but it is still putting this to std.out. Any suggestions?

Thanks,
Jordan







On Feb 13, 2011, at 4:43 PM, João Rodrigues wrote:

> Hello,
> 
> That was indeed a dumb thing to leave there...My apologies.. However, as Peter pointed out, it has been corrected (and improved) in later versions so if you download the Git version that printing will be gone and actually the elements of the atoms should be automatically guessed!
> 
> Best!
> 
> João