[Biopython] Trhird party library

[Dragoslav Zaric]

Thanks Rodrigo,

I have come to same conclusion after little searching.
Also hosting for django is very common.

kind regards

On Sun, Sep 19, 2010 at 5:59 PM, Rodrigo Faccioli <
rodrigo_faccioli at uol.com.br> wrote:

> Hi,
>
> I've worked with BioPython in web project. I've installed BioPython
> normally
> in our ubuntu server.
>
> My web project was developed its front-end in jsp. But I ran my scripts
> with
> BioPython. You can find this project in
> http://glu.fcfrp.usp.br:8180/prometheus/
>
> About the python frameworks, I've read Django is an excellent framework.
>
> Thanks in advance,
>
> --
> Rodrigo Antonio Faccioli
> Ph.D Student in Electrical Engineering
> University of Sao Paulo - USP
> Engineering School of Sao Carlos - EESC
> Department of Electrical Engineering - SEL
> Intelligent System in Structure Bioinformatics
> http://laips.sel.eesc.usp.br
> Phone: 55 (16) 3373-9366 Ext 229
> Curriculum Lattes - http://lattes.cnpq.br/1025157978990218
> Public Profile - http://br.linkedin.com/pub/rodrigo-faccioli/7/589/a5
>
>
> On Sun, Sep 19, 2010 at 9:11 AM, Dragoslav Zaric
> <zaricdragoslav at gmail.com>wrote:
>
> > Anyway,
> >
> > I will try simplest thing, to copy folder with biopython modules in some
> > folder of web app and access modules trough absolute path of web server,
> > this must work.
> >
> > At first I planned to use django web framework, but I recently discovered
> > there are
> > many python web frameworks. So i prefer most simplistic and effective
> > frameworks,
> > I will check out
> >
> > web.py
> >
> > it looks nice at first glance.
> >
> > Kind regards
> >
> > On Sun, Sep 19, 2010 at 3:02 PM, Sean Davis <sdavis2 at mail.nih.gov>
> wrote:
> >
> > >
> > >
> > > On Sun, Sep 19, 2010 at 2:33 AM, Dragoslav Zaric <
> > zaricdragoslav at gmail.com
> > > > wrote:
> > >
> > >> Did anybody used biopython as third part library, like for example in
> > >> python
> > >> web project ?
> > >> I ask this because probably you can not expect to find or install
> > >> biopython
> > >> in provider server
> > >> environment.
> > >>
> > >> For example, after installing biopython in windows environment, you
> can
> > >> see
> > >> that biopython is
> > >> installed inside python 2.6 installation:
> > >>
> > >> C:\Python26\Lib\site-packages\Bio
> > >> C:\Python26\Lib\site-packages\BioSQL
> > >> C:\Python26\Lib\site-packages\numpy
> > >>
> > >> So can you copy these folders to, for example, \Lib\ folder of web
> > >> project,
> > >> and reference them
> > >> somehow from code ?
> > >>
> > >> Of course I can test this by myself, and I will do this, but maybe
> > >> somebody
> > >> have experience
> > >> with this problem, and it would be probably good info for others in
> this
> > >> forum.
> > >>
> > >>
> > > Hi, Dragoslav.  The python developers thought of this problem.
> > >
> > > http://docs.python.org/install/#alternate-installation-the-home-scheme
> > >
> > > Sean
> > >
> > >
> >
> >
> >
> > --
> > Dragoslav Zaric
> >
> > Professional Programmer
> > MSc Astrophysics
> > _______________________________________________
> > Biopython mailing list  -  Biopython at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/biopython
> >
> _______________________________________________
> Biopython mailing list  -  Biopython at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biopython
>



-- 
Dragoslav Zaric

Professional Programmer
MSc Astrophysics