[Biopython] Trhird party library

[Rodrigo Faccioli]

Hi,

I've worked with BioPython in web project. I've installed BioPython normally
in our ubuntu server.

My web project was developed its front-end in jsp. But I ran my scripts with
BioPython. You can find this project in
http://glu.fcfrp.usp.br:8180/prometheus/

About the python frameworks, I've read Django is an excellent framework.

Thanks in advance,

--
Rodrigo Antonio Faccioli
Ph.D Student in Electrical Engineering
University of Sao Paulo - USP
Engineering School of Sao Carlos - EESC
Department of Electrical Engineering - SEL
Intelligent System in Structure Bioinformatics
http://laips.sel.eesc.usp.br
Phone: 55 (16) 3373-9366 Ext 229
Curriculum Lattes - http://lattes.cnpq.br/1025157978990218
Public Profile - http://br.linkedin.com/pub/rodrigo-faccioli/7/589/a5


On Sun, Sep 19, 2010 at 9:11 AM, Dragoslav Zaric
<zaricdragoslav at gmail.com>wrote:

> Anyway,
>
> I will try simplest thing, to copy folder with biopython modules in some
> folder of web app and access modules trough absolute path of web server,
> this must work.
>
> At first I planned to use django web framework, but I recently discovered
> there are
> many python web frameworks. So i prefer most simplistic and effective
> frameworks,
> I will check out
>
> web.py
>
> it looks nice at first glance.
>
> Kind regards
>
> On Sun, Sep 19, 2010 at 3:02 PM, Sean Davis <sdavis2 at mail.nih.gov> wrote:
>
> >
> >
> > On Sun, Sep 19, 2010 at 2:33 AM, Dragoslav Zaric <
> zaricdragoslav at gmail.com
> > > wrote:
> >
> >> Did anybody used biopython as third part library, like for example in
> >> python
> >> web project ?
> >> I ask this because probably you can not expect to find or install
> >> biopython
> >> in provider server
> >> environment.
> >>
> >> For example, after installing biopython in windows environment, you can
> >> see
> >> that biopython is
> >> installed inside python 2.6 installation:
> >>
> >> C:\Python26\Lib\site-packages\Bio
> >> C:\Python26\Lib\site-packages\BioSQL
> >> C:\Python26\Lib\site-packages\numpy
> >>
> >> So can you copy these folders to, for example, \Lib\ folder of web
> >> project,
> >> and reference them
> >> somehow from code ?
> >>
> >> Of course I can test this by myself, and I will do this, but maybe
> >> somebody
> >> have experience
> >> with this problem, and it would be probably good info for others in this
> >> forum.
> >>
> >>
> > Hi, Dragoslav.  The python developers thought of this problem.
> >
> > http://docs.python.org/install/#alternate-installation-the-home-scheme
> >
> > Sean
> >
> >
>
>
>
> --
> Dragoslav Zaric
>
> Professional Programmer
> MSc Astrophysics
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