[Biopython] parsing newick trees in memory

Michael Thon mike.thon at gmail.com
Sun Oct 10 02:09:42 EDT 2010


I have a String containing a tree in newick format and I want to turn it into biopython objects.  The Bio.Phylo.read() function seems to only take file names or file handles as parameters.  Is there any way to do this without actually saving the string to a file first?
Thanks
Mike


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