[Biopython] Mafft Alignment Output file

[Peter]

On Mon, Nov 29, 2010 at 9:44 PM, Ömer AN <bounlu at gmail.com> wrote:
>
> Now everything is clear, this is a nice alternative to replace with !
>
> Thanks a lot for your assistance !
>

I'm glad we solved it - I haven't used MAFFT recently so this
was not fresh in my mind. I have tried to make some clarifications
to the MafftCommandline documentation to improve this for the
next release of Biopython. So thank you for your feedback.

Regards,

Peter