[Biopython] Could Bio.SeqIO write EMBL file?

[Anne Pajon]

On 4 Mar 2010, at 20:04, Peter wrote:

> On Thu, Mar 4, 2010 at 7:59 PM, Peter  
> <biopython at maubp.freeserve.co.uk> wrote:
>> On Thu, Mar 4, 2010 at 2:26 PM, Anne Pajon <ap12 at sanger.ac.uk> wrote:
>>> Hi Peter,
>>>
>>> I'm happy to work with git. I've already read the bioython wiki  
>>> page on it
>>> so I'm hoping to do the right thing.
>>
>> OK - now you get to try doing a merge (grin), as I have committed the
>> SQ line change (with some minor changes, for example I changed your
>> variable names to keep the line length down).
>
> I also noted in a comment that we should perhaps be writing out
> GenBank and EMBL in lower case (as I noted a while ago on Bug
> 2999). It will also make counting the bases easier if we only need
> to look at one case ;)
>
> As an EMBL file user, does this seem like the right thing to do?

I do not really mind one way or another. EMBOSS seems to write the  
sequence all in upper case.

Anne.

>
> Peter

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Dr Anne Pajon - Pathogen Genomics, Team 81
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