[Biopython] Exon/intron locations for drosophila R4

[Peter]

On Fri, Jun 25, 2010 at 5:28 PM, John Reid <j.reid at mail.cryst.bbk.ac.uk> wrote:
> Hi,
>
> What's the easiest way to get exon locations for release 4 of the
> melanogaster genome into my python script? I have been using a
> DAS interface to UCSC but it doesn't seem to supply this info.
>
> Thanks,
> John.

You could download by FTP from here:
ftp://ftp.ncbi.nih.gov/genomes/Drosophila_melanogaster/RELEASE_4.1/

The *.gbk or *.gff files should give you the exons.

Peter