[Biopython] BioJava-like seqres alignment for Bio.PDB

Bryan Lunt lunt at ctbp.ucsd.edu
Tue Jun 29 02:36:58 EDT 2010


Greetings All,

Does anyone have any code for easy alignment between the SEQRES entry
in a pdb file and the actual ATOM/HETATM entries in the chain?

In biojava, this is just one of the options when you parse a PDB file,
it would certainly be useful.

Does anyone have any code for this?
Shall I write it?

Thanks!
-Bryan Lunt


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