[Biopython] Bio.SeqIO.index() - gzip support and/or index stored on disk?
Renato Alves
rjalves at igc.gulbenkian.pt
Mon Jun 7 04:01:25 EDT 2010
Quoting Peter on 06/04/2010 09:42 AM:
> Unfortunately I was inconsistent about which order I used in my email
> (gzip vs on disk indexes) so I'm not sure which you are talking about.
> Are you saying supporting on disk indexes would be your priority (even
> though you did ask look at gzip support in the past)?
Yes exactly. The gzip support became a non priority at least for our
current local uses. On the other hand, disk support would be quite helpful.
As a matter of fact we borrowed a little of your SeqIO.index() sqlite
code you have on a github branch.
Renato.
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